WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:Y45F10A.6a Sequence Name  Y45F10A.6a
Length (nt)  3744   Chromosome Location  IV: 13477112-13477151
Chromosome . Primary Identifier  IV Chromosome Location . Start  13477112
Chromosome Location . End  13477151
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y45F10A.6a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE40583 TBC-9, isoform a 142.4 1247 Caenorhabditis elegans
 

Other

4 RNAi

WormBase ID
WBRNAi00000747
WBRNAi00056571
WBRNAi00020588
WBRNAi00076791

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:Y45F10A.6a 13477112 13477151 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00012868 tbc-9 Y45F10A.6 Caenorhabditis elegans

18 Locations


Feature . Primary Identifier
Start End Strand
CDS:Y45F10A.6a 13477112 13477151 -1
CDS:Y45F10A.6a 13477993 13478115 -1
CDS:Y45F10A.6a 13478158 13478563 -1
CDS:Y45F10A.6a 13479650 13479812 -1
CDS:Y45F10A.6a 13480421 13480835 -1
CDS:Y45F10A.6a 13481947 13482056 -1
CDS:Y45F10A.6a 13485527 13485733 -1
CDS:Y45F10A.6a 13486747 13486992 -1
CDS:Y45F10A.6a 13487915 13488667 -1
CDS:Y45F10A.6a 13489486 13489731 -1
CDS:Y45F10A.6a 13489795 13489927 -1
CDS:Y45F10A.6a 13497766 13497909 -1
CDS:Y45F10A.6a 13497960 13498105 -1
CDS:Y45F10A.6a 13499040 13499173 -1
CDS:Y45F10A.6a 13499228 13499314 -1
CDS:Y45F10A.6a 13500819 13500914 -1
CDS:Y45F10A.6a 13500974 13501221 -1
CDS:Y45F10A.6a 13502799 13502845 -1

1 Sequence

Length
3744

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:Y45F10A.6a.1 Y45F10A.6a.1 3933   IV: 13476934-13502856