WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y45F10A.7c.1 Sequence Name  Y45F10A.7c.1
Length (nt)  1056   Chromosome Location  IV: 13493952-13497066
Chromosome . Primary Identifier  IV Chromosome Location . Start  13493952
Chromosome Location . End  13497066 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y45F10A.7c.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00012869 Y45F10A.7 Y45F10A.7 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y45F10A.7c Y45F10A.7c 1056   IV: 13493952-13493970

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y45F10A.7c.1 13493952 13497066 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

6 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon150504   19   IV: 13493952-13493970 Caenorhabditis elegans
Exon150508   97   IV: 13495144-13495240 Caenorhabditis elegans
Exon150512   157   IV: 13495289-13495445 Caenorhabditis elegans
Exon150516   198   IV: 13495499-13495696 Caenorhabditis elegans
Exon150520   228   IV: 13495747-13495974 Caenorhabditis elegans
Exon150522   357   IV: 13496710-13497066 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y45F10A.7c.1 13493952 13497066 1

1 Sequence

Length
1056

1 Sequence Ontology Term

Identifier Name Description
transcript