WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y45F10A.7b.1 Sequence Name  Y45F10A.7b.1
Length (nt)  1506   Chromosome Location  IV: 13494683-13497255
Chromosome . Primary Identifier  IV Chromosome Location . Start  13494683
Chromosome Location . End  13497255 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y45F10A.7b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00012869 Y45F10A.7 Y45F10A.7 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y45F10A.7b Y45F10A.7b 1227   IV: 13494773-13494962

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y45F10A.7b.1 13494683 13497255 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

6 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon150505   280   IV: 13494683-13494962 Caenorhabditis elegans
Exon150507   97   IV: 13495144-13495240 Caenorhabditis elegans
Exon150511   157   IV: 13495289-13495445 Caenorhabditis elegans
Exon150515   198   IV: 13495499-13495696 Caenorhabditis elegans
Exon150519   228   IV: 13495747-13495974 Caenorhabditis elegans
Exon150525   546   IV: 13496710-13497255 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y45F10A.7b.1 13494683 13497255 1

1 Sequence

Length
1506

1 Sequence Ontology Term

Identifier Name Description
transcript