WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y45F10A.4.1 Sequence Name  Y45F10A.4.1
Length (nt)  1302   Chromosome Location  IV: 13506079-13509215
Chromosome . Primary Identifier  IV Chromosome Location . Start  13506079
Chromosome Location . End  13509215 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y45F10A.4.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00012867 seld-1 Y45F10A.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y45F10A.4 Y45F10A.4 1137   IV: 13506079-13506259

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y45F10A.4.1 13506079 13509215 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

4 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon150569   181   IV: 13506079-13506259 Caenorhabditis elegans
Exon150570   254   IV: 13506702-13506955 Caenorhabditis elegans
Exon150572   564   IV: 13507554-13508117 Caenorhabditis elegans
Exon150574   303   IV: 13508913-13509215 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y45F10A.4.1 13506079 13509215 1

1 Sequence

Length
1302

1 Sequence Ontology Term

Identifier Name Description
transcript