WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y45F10A.2.1 Sequence Name  Y45F10A.2.1
Length (nt)  1737   Chromosome Location  IV: 13510307-13512162
Chromosome . Primary Identifier  IV Chromosome Location . Start  13510307
Chromosome Location . End  13512162 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y45F10A.2.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004239 puf-3 Y45F10A.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y45F10A.2 Y45F10A.2 1509   IV: 13510518-13510887

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y45F10A.2.1 13510307 13512162 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

3 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon150582   581   IV: 13510307-13510887 Caenorhabditis elegans
Exon150583   810   IV: 13510935-13511744 Caenorhabditis elegans
Exon150584   346   IV: 13511817-13512162 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y45F10A.2.1 13510307 13512162 -1

1 Sequence

Length
1737

1 Sequence Ontology Term

Identifier Name Description
transcript