WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F52G2.2d.1 Sequence Name  F52G2.2d.1
Length (nt)  2616   Chromosome Location  IV: 13522095-13532801
Chromosome . Primary Identifier  IV Chromosome Location . Start  13522095
Chromosome Location . End  13532801 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F52G2.2d.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004681 rsd-2 F52G2.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F52G2.2d F52G2.2d 2616   IV: 13522095-13522130

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F52G2.2d.1 13522095 13532801 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

14 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon150617   36   IV: 13522095-13522130 Caenorhabditis elegans
Exon150622   561   IV: 13522873-13523433 Caenorhabditis elegans
Exon150626   240   IV: 13524357-13524596 Caenorhabditis elegans
Exon150630   177   IV: 13525737-13525913 Caenorhabditis elegans
Exon150634   103   IV: 13525979-13526081 Caenorhabditis elegans
Exon150638   156   IV: 13526134-13526289 Caenorhabditis elegans
Exon150641   109   IV: 13529251-13529359 Caenorhabditis elegans
Exon150644   176   IV: 13529410-13529585 Caenorhabditis elegans
Exon150647   128   IV: 13529636-13529763 Caenorhabditis elegans
Exon150650   106   IV: 13530721-13530826 Caenorhabditis elegans
Exon150653   164   IV: 13530880-13531043 Caenorhabditis elegans
Exon150656   217   IV: 13531629-13531845 Caenorhabditis elegans
Exon150659   279   IV: 13532312-13532590 Caenorhabditis elegans
Exon150660   164   IV: 13532638-13532801 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F52G2.2d.1 13522095 13532801 -1

1 Sequence

Length
2616

1 Sequence Ontology Term

Identifier Name Description
transcript