WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y45F10B.13c.1 Sequence Name  Y45F10B.13c.1
Length (nt)  558   Chromosome Location  IV: 13549762-13557440
Chromosome . Primary Identifier  IV Chromosome Location . Start  13549762
Chromosome Location . End  13557440 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y45F10B.13c.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00012875 Y45F10B.13 Y45F10B.13 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y45F10B.13c Y45F10B.13c 558   IV: 13549762-13549782

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y45F10B.13c.1 13549762 13557440 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

7 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon150692   21   IV: 13549762-13549782 Caenorhabditis elegans
Exon150695   56   IV: 13549831-13549886 Caenorhabditis elegans
Exon150698   79   IV: 13549936-13550014 Caenorhabditis elegans
Exon150701   89   IV: 13550587-13550675 Caenorhabditis elegans
Exon150704   218   IV: 13550726-13550943 Caenorhabditis elegans
Exon150707   60   IV: 13552156-13552215 Caenorhabditis elegans
Exon150709   35   IV: 13557406-13557440 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y45F10B.13c.1 13549762 13557440 -1

1 Sequence

Length
558

1 Sequence Ontology Term

Identifier Name Description
transcript