WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F52G2.3.1 Sequence Name  F52G2.3.1
Length (nt)  2007   Chromosome Location  IV: 13543405-13548230
Chromosome . Primary Identifier  IV Chromosome Location . Start  13543405
Chromosome Location . End  13548230 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F52G2.3.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00009943 F52G2.3 F52G2.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F52G2.3 F52G2.3 1956   IV: 13543448-13543852

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F52G2.3.1 13543405 13548230 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon150731   448   IV: 13543405-13543852 Caenorhabditis elegans
Exon150735   246   IV: 13544826-13545071 Caenorhabditis elegans
Exon150736   177   IV: 13545511-13545687 Caenorhabditis elegans
Exon150737   103   IV: 13545730-13545832 Caenorhabditis elegans
Exon150738   123   IV: 13545883-13546005 Caenorhabditis elegans
Exon150739   204   IV: 13546050-13546253 Caenorhabditis elegans
Exon150740   135   IV: 13546480-13546614 Caenorhabditis elegans
Exon150742   147   IV: 13547173-13547319 Caenorhabditis elegans
Exon150743   306   IV: 13547371-13547676 Caenorhabditis elegans
Exon150744   118   IV: 13548113-13548230 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F52G2.3.1 13543405 13548230 -1

1 Sequence

Length
2007

1 Sequence Ontology Term

Identifier Name Description
transcript