WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:Y45F10B.13a Sequence Name  Y45F10B.13a
Length (nt)  1902   Chromosome Location  IV: 13549762-13549782
Chromosome . Primary Identifier  IV Chromosome Location . Start  13549762
Chromosome Location . End  13549782
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y45F10B.13a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE32022 Y45F10B.13, isoform a 72.4 633 Caenorhabditis elegans
 

Other

6 RNAi

WormBase ID
WBRNAi00056582
WBRNAi00008215
WBRNAi00015431
WBRNAi00020594
WBRNAi00037086
WBRNAi00002208

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:Y45F10B.13a 13549762 13549782 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00012875 Y45F10B.13 Y45F10B.13 Caenorhabditis elegans

12 Locations


Feature . Primary Identifier
Start End Strand
CDS:Y45F10B.13a 13549762 13549782 -1
CDS:Y45F10B.13a 13549831 13549886 -1
CDS:Y45F10B.13a 13549936 13550014 -1
CDS:Y45F10B.13a 13550587 13550675 -1
CDS:Y45F10B.13a 13550726 13550943 -1
CDS:Y45F10B.13a 13552156 13552215 -1
CDS:Y45F10B.13a 13557406 13557486 -1
CDS:Y45F10B.13a 13557798 13557932 -1
CDS:Y45F10B.13a 13558936 13559319 -1
CDS:Y45F10B.13a 13559394 13559617 -1
CDS:Y45F10B.13a 13559724 13560195 -1
CDS:Y45F10B.13a 13561506 13561588 -1

1 Sequence

Length
1902

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:Y45F10B.13a.1 Y45F10B.13a.1 2200   IV: 13549605-13561729