WormMine

WS296

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y45F10B.10a.1 Sequence Name  Y45F10B.10a.1
Length (nt)  4890   Chromosome Location  IV: 13561861-13574440
Chromosome . Primary Identifier  IV Chromosome Location . Start  13561861
Chromosome Location . End  13574440 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y45F10B.10a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004265 qui-1 Y45F10B.10 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y45F10B.10a Y45F10B.10a 4779   IV: 13561873-13562011

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:Y45F10B.10a.1 13561861 13574440 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

19 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon150747   151   IV: 13561861-13562011 Caenorhabditis elegans
Exon150750   182   IV: 13562383-13562564 Caenorhabditis elegans
Exon150752   100   IV: 13563016-13563115 Caenorhabditis elegans
Exon150755   137   IV: 13565198-13565334 Caenorhabditis elegans
Exon150756   219   IV: 13566066-13566284 Caenorhabditis elegans
Exon150757   126   IV: 13566334-13566459 Caenorhabditis elegans
Exon150759   109   IV: 13566528-13566636 Caenorhabditis elegans
Exon150761   190   IV: 13566997-13567186 Caenorhabditis elegans
Exon150763   247   IV: 13567235-13567481 Caenorhabditis elegans
Exon150766   675   IV: 13568561-13569235 Caenorhabditis elegans
Exon150769   223   IV: 13569562-13569784 Caenorhabditis elegans
Exon150771   479   IV: 13569840-13570318 Caenorhabditis elegans
Exon150773   314   IV: 13570405-13570718 Caenorhabditis elegans
Exon150775   244   IV: 13571180-13571423 Caenorhabditis elegans
Exon150777   354   IV: 13571476-13571829 Caenorhabditis elegans
Exon150779   203   IV: 13572135-13572337 Caenorhabditis elegans
Exon150781   368   IV: 13572612-13572979 Caenorhabditis elegans
Exon150783   398   IV: 13573332-13573729 Caenorhabditis elegans
Exon150786   171   IV: 13574270-13574440 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:Y45F10B.10a.1 13561861 13574440 1

1 Sequence

Length
4890

1 Sequence Ontology Term

Identifier Name Description
transcript