WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y45F10B.5.1 Sequence Name  Y45F10B.5.1
Length (nt)  1002   Chromosome Location  IV: 13583209-13584479
Chromosome . Primary Identifier  IV Chromosome Location . Start  13583209
Chromosome Location . End  13584479 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y45F10B.5.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00005675 sru-12 Y45F10B.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y45F10B.5 Y45F10B.5 981   IV: 13583230-13583460

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y45F10B.5.1 13583209 13584479 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

5 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon150782   252   IV: 13583209-13583460 Caenorhabditis elegans
Exon150783   210   IV: 13583594-13583803 Caenorhabditis elegans
Exon150784   159   IV: 13583851-13584009 Caenorhabditis elegans
Exon150785   198   IV: 13584053-13584250 Caenorhabditis elegans
Exon150786   183   IV: 13584297-13584479 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y45F10B.5.1 13583209 13584479 1

1 Sequence

Length
1002

1 Sequence Ontology Term

Identifier Name Description
transcript