WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y45F10B.6.1 Sequence Name  Y45F10B.6.1
Length (nt)  975   Chromosome Location  IV: 13584946-13587288
Chromosome . Primary Identifier  IV Chromosome Location . Start  13584946
Chromosome Location . End  13587288 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y45F10B.6.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00005674 sru-11 Y45F10B.6 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y45F10B.6 Y45F10B.6 975   IV: 13584946-13585176

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y45F10B.6.1 13584946 13587288 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

5 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon150842   231   IV: 13584946-13585176 Caenorhabditis elegans
Exon150844   210   IV: 13585319-13585528 Caenorhabditis elegans
Exon150845   159   IV: 13585571-13585729 Caenorhabditis elegans
Exon150846   198   IV: 13585781-13585978 Caenorhabditis elegans
Exon150847   177   IV: 13587112-13587288 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y45F10B.6.1 13584946 13587288 1

1 Sequence

Length
975

1 Sequence Ontology Term

Identifier Name Description
transcript