WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y45F10B.11.1 Sequence Name  Y45F10B.11.1
Length (nt)  978   Chromosome Location  IV: 13588993-13590337
Chromosome . Primary Identifier  IV Chromosome Location . Start  13588993
Chromosome Location . End  13590337 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y45F10B.11.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00005672 sru-9 Y45F10B.11 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y45F10B.11 Y45F10B.11 978   IV: 13588993-13589223

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y45F10B.11.1 13588993 13590337 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

5 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon150852   231   IV: 13588993-13589223 Caenorhabditis elegans
Exon150853   210   IV: 13589458-13589667 Caenorhabditis elegans
Exon150854   159   IV: 13589710-13589868 Caenorhabditis elegans
Exon150855   198   IV: 13589915-13590112 Caenorhabditis elegans
Exon150856   180   IV: 13590158-13590337 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y45F10B.11.1 13588993 13590337 1

1 Sequence

Length
978

1 Sequence Ontology Term

Identifier Name Description
transcript