WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C08F11.13c.1 Sequence Name  C08F11.13c.1
Length (nt)  1437   Chromosome Location  IV: 13607436-13609892
Chromosome . Primary Identifier  IV Chromosome Location . Start  13607436
Chromosome Location . End  13609892 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C08F11.13c.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00007460 C08F11.13 C08F11.13 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C08F11.13c C08F11.13c 819   IV: 13608034-13608299

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C08F11.13c.1 13607436 13609892 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

5 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon150865   298   IV: 13607436-13607733 Caenorhabditis elegans
Exon150869   521   IV: 13607779-13608299 Caenorhabditis elegans
Exon150875   161   IV: 13609145-13609305 Caenorhabditis elegans
Exon150880   283   IV: 13609391-13609673 Caenorhabditis elegans
Exon150885   174   IV: 13609719-13609892 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C08F11.13c.1 13607436 13609892 -1

1 Sequence

Length
1437

1 Sequence Ontology Term

Identifier Name Description
transcript