WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C08F11.1.1 Sequence Name  C08F11.1.1
Length (nt)  698   Chromosome Location  IV: 13623833-13625433
Chromosome . Primary Identifier  IV Chromosome Location . Start  13623833
Chromosome Location . End  13625433 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C08F11.1.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00007450 C08F11.1 C08F11.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C08F11.1 C08F11.1 627   IV: 13623855-13623926

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C08F11.1.1 13623833 13625433 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

6 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon150991   94   IV: 13623833-13623926 Caenorhabditis elegans
Exon150992   63   IV: 13623976-13624038 Caenorhabditis elegans
Exon150993   165   IV: 13624087-13624251 Caenorhabditis elegans
Exon150997   81   IV: 13624925-13625005 Caenorhabditis elegans
Exon150999   90   IV: 13625093-13625182 Caenorhabditis elegans
Exon151000   205   IV: 13625229-13625433 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C08F11.1.1 13623833 13625433 1

1 Sequence

Length
698

1 Sequence Ontology Term

Identifier Name Description
transcript