WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C08F11.8.1 Sequence Name  C08F11.8.1
Length (nt)  2055   Chromosome Location  IV: 13639260-13644402
Chromosome . Primary Identifier  IV Chromosome Location . Start  13639260
Chromosome Location . End  13644402 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C08F11.8.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00007455 ugt-22 C08F11.8 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C08F11.8 C08F11.8 1605   IV: 13639350-13639514

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C08F11.8.1 13639260 13644402 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon150989   255   IV: 13639260-13639514 Caenorhabditis elegans
Exon150997   177   IV: 13640428-13640604 Caenorhabditis elegans
Exon151001   133   IV: 13640755-13640887 Caenorhabditis elegans
Exon151007   263   IV: 13641597-13641859 Caenorhabditis elegans
Exon151011   230   IV: 13642267-13642496 Caenorhabditis elegans
Exon151013   137   IV: 13642545-13642681 Caenorhabditis elegans
Exon151015   86   IV: 13642906-13642991 Caenorhabditis elegans
Exon151018   137   IV: 13643264-13643400 Caenorhabditis elegans
Exon151021   96   IV: 13643685-13643780 Caenorhabditis elegans
Exon151024   541   IV: 13643862-13644402 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C08F11.8.1 13639260 13644402 1

1 Sequence

Length
2055

1 Sequence Ontology Term

Identifier Name Description
transcript