WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C08F11.8.2 Sequence Name  C08F11.8.2
Length (nt)  2176   Chromosome Location  IV: 13639273-13644567
Chromosome . Primary Identifier  IV Chromosome Location . Start  13639273
Chromosome Location . End  13644567 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C08F11.8.2

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00007455 ugt-22 C08F11.8 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C08F11.8 C08F11.8 1605   IV: 13639350-13639514

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C08F11.8.2 13639273 13644567 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

11 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon150990   19   IV: 13639273-13639291 Caenorhabditis elegans
Exon150991   192   IV: 13639323-13639514 Caenorhabditis elegans
Exon150998   177   IV: 13640428-13640604 Caenorhabditis elegans
Exon151002   133   IV: 13640755-13640887 Caenorhabditis elegans
Exon151008   263   IV: 13641597-13641859 Caenorhabditis elegans
Exon151012   230   IV: 13642267-13642496 Caenorhabditis elegans
Exon151014   137   IV: 13642545-13642681 Caenorhabditis elegans
Exon151016   86   IV: 13642906-13642991 Caenorhabditis elegans
Exon151019   137   IV: 13643264-13643400 Caenorhabditis elegans
Exon151022   96   IV: 13643685-13643780 Caenorhabditis elegans
Exon151025   706   IV: 13643862-13644567 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C08F11.8.2 13639273 13644567 1

1 Sequence

Length
2176

1 Sequence Ontology Term

Identifier Name Description
transcript