WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T23G4.3.1 Sequence Name  T23G4.3.1
Length (nt)  1631   Chromosome Location  IV: 13685076-13687015
Chromosome . Primary Identifier  IV Chromosome Location . Start  13685076
Chromosome Location . End  13687015 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T23G4.3.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00011959 nyn-1 T23G4.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T23G4.3 T23G4.3 1503   IV: 13685201-13685443

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T23G4.3.1 13685076 13687015 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

4 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon151174   368   IV: 13685076-13685443 Caenorhabditis elegans
Exon151175   426   IV: 13685630-13686055 Caenorhabditis elegans
Exon151176   203   IV: 13686118-13686320 Caenorhabditis elegans
Exon151177   634   IV: 13686382-13687015 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T23G4.3.1 13685076 13687015 -1

1 Sequence

Length
1631

1 Sequence Ontology Term

Identifier Name Description
transcript