WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T23G4.1.1 Sequence Name  T23G4.1.1
Length (nt)  1758   Chromosome Location  IV: 13701208-13704082
Chromosome . Primary Identifier  IV Chromosome Location . Start  13701208
Chromosome Location . End  13704082 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T23G4.1.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006580 tlp-1 T23G4.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T23G4.1 T23G4.1 1065   IV: 13701774-13702016

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T23G4.1.1 13701208 13704082 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

4 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon151242   809   IV: 13701208-13702016 Caenorhabditis elegans
Exon151244   232   IV: 13702217-13702448 Caenorhabditis elegans
Exon151248   539   IV: 13702618-13703156 Caenorhabditis elegans
Exon151251   178   IV: 13703905-13704082 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T23G4.1.1 13701208 13704082 -1

1 Sequence

Length
1758

1 Sequence Ontology Term

Identifier Name Description
transcript