WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C47A4.3.2 Sequence Name  C47A4.3.2
Length (nt)  1050   Chromosome Location  IV: 13740948-13742270
Chromosome . Primary Identifier  IV Chromosome Location . Start  13740948
Chromosome Location . End  13742270 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C47A4.3.2

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00008124 C47A4.3 C47A4.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C47A4.3 C47A4.3 951   IV: 13741042-13741122

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C47A4.3.2 13740948 13742270 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

6 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon151427   175   IV: 13740948-13741122 Caenorhabditis elegans
Exon151430   78   IV: 13741170-13741247 Caenorhabditis elegans
Exon151432   141   IV: 13741299-13741439 Caenorhabditis elegans
Exon151434   198   IV: 13741485-13741682 Caenorhabditis elegans
Exon151437   129   IV: 13741753-13741881 Caenorhabditis elegans
Exon151439   329   IV: 13741942-13742270 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C47A4.3.2 13740948 13742270 -1

1 Sequence

Length
1050

1 Sequence Ontology Term

Identifier Name Description
transcript