WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y45F10D.11b.1 Sequence Name  Y45F10D.11b.1
Length (nt)  504   Chromosome Location  IV: 13782443-13783051
Chromosome . Primary Identifier  IV Chromosome Location . Start  13782443
Chromosome Location . End  13783051 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y45F10D.11b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00012890 lact-9 Y45F10D.11 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y45F10D.11b Y45F10D.11b 504   IV: 13782443-13782611

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y45F10D.11b.1 13782443 13783051 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

3 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon151639   169   IV: 13782443-13782611 Caenorhabditis elegans
Exon151641   282   IV: 13782661-13782942 Caenorhabditis elegans
Exon151642   53   IV: 13782999-13783051 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y45F10D.11b.1 13782443 13783051 -1

1 Sequence

Length
504

1 Sequence Ontology Term

Identifier Name Description
transcript