WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:H08M01.2b Sequence Name  H08M01.2b
Length (nt)  4026   Chromosome Location  IV: 13827901-13828089
Chromosome . Primary Identifier  IV Chromosome Location . Start  13827901
Chromosome Location . End  13828089
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
H08M01.2b

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE36176 RGA-5, isoform b 151.0 1341 Caenorhabditis elegans
 

Other

12 RNAi

WormBase ID
WBRNAi00049341
WBRNAi00016219
WBRNAi00109548
WBRNAi00033683
WBRNAi00109159
WBRNAi00023507
WBRNAi00024053
WBRNAi00023255
WBRNAi00023767
WBRNAi00109354
WBRNAi00109257
WBRNAi00109451

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:H08M01.2b 13827901 13828089 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00010374 rga-5 H08M01.2 Caenorhabditis elegans

21 Locations


Feature . Primary Identifier
Start End Strand
CDS:H08M01.2b 13827901 13828089 1
CDS:H08M01.2b 13828465 13828585 1
CDS:H08M01.2b 13828997 13829115 1
CDS:H08M01.2b 13829743 13830173 1
CDS:H08M01.2b 13830724 13830924 1
CDS:H08M01.2b 13831695 13831834 1
CDS:H08M01.2b 13831962 13832077 1
CDS:H08M01.2b 13832984 13833592 1
CDS:H08M01.2b 13836988 13837371 1
CDS:H08M01.2b 13839297 13839481 1
CDS:H08M01.2b 13839579 13839640 1
CDS:H08M01.2b 13839906 13839963 1
CDS:H08M01.2b 13840117 13840243 1
CDS:H08M01.2b 13840480 13840609 1
CDS:H08M01.2b 13841100 13841513 1
CDS:H08M01.2b 13842070 13842161 1
CDS:H08M01.2b 13842369 13842512 1
CDS:H08M01.2b 13842637 13842723 1
CDS:H08M01.2b 13843175 13843324 1
CDS:H08M01.2b 13844509 13844666 1
CDS:H08M01.2b 13844801 13844909 1

1 Sequence

Length
4026

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:H08M01.2b.1 H08M01.2b.1 4123   IV: 13827886-13844991