WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:B0513.9b.1 Sequence Name  B0513.9b.1
Length (nt)  416   Chromosome Location  IV: 13860375-13861384
Chromosome . Primary Identifier  IV Chromosome Location . Start  13860375
Chromosome Location . End  13861384 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
B0513.9b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00007200 vamp-8 B0513.9 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:B0513.9b B0513.9b 342   IV: 13860449-13860613

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:B0513.9b.1 13860375 13861384 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

3 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon152025   239   IV: 13860375-13860613 Caenorhabditis elegans
Exon152028   87   IV: 13860662-13860748 Caenorhabditis elegans
Exon152031   90   IV: 13861295-13861384 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:B0513.9b.1 13860375 13861384 -1

1 Sequence

Length
416

1 Sequence Ontology Term

Identifier Name Description
transcript