WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:B0513.2a.1 Sequence Name  B0513.2a.1
Length (nt)  766   Chromosome Location  IV: 13882734-13884177
Chromosome . Primary Identifier  IV Chromosome Location . Start  13882734
Chromosome Location . End  13884177 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
B0513.2a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00007195 thoc-7 B0513.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:B0513.2a B0513.2a 633   IV: 13882734-13882886

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:B0513.2a.1 13882734 13884177 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

5 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon152115   153   IV: 13882734-13882886 Caenorhabditis elegans
Exon152116   105   IV: 13882933-13883037 Caenorhabditis elegans
Exon152118   68   IV: 13883386-13883453 Caenorhabditis elegans
Exon152120   206   IV: 13883506-13883711 Caenorhabditis elegans
Exon152123   234   IV: 13883944-13884177 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:B0513.2a.1 13882734 13884177 1

1 Sequence

Length
766

1 Sequence Ontology Term

Identifier Name Description
transcript