WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y37A1A.2.2 Sequence Name  Y37A1A.2.2
Length (nt)  1515   Chromosome Location  IV: 13906001-13912297
Chromosome . Primary Identifier  IV Chromosome Location . Start  13906001
Chromosome Location . End  13912297 Method  Coding_transcript
Quick Links:
 
Quick Links:
 

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y37A1A.2.2

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00012535 Y37A1A.2 Y37A1A.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y37A1A.2 Y37A1A.2 1395   IV: 13906114-13906320

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y37A1A.2.2 13906001 13912297 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

7 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon152164   320   IV: 13906001-13906320 Caenorhabditis elegans
Exon152170   136   IV: 13906425-13906560 Caenorhabditis elegans
Exon152178   175   IV: 13907386-13907560 Caenorhabditis elegans
Exon152183   189   IV: 13907864-13908052 Caenorhabditis elegans
Exon152190   324   IV: 13908987-13909310 Caenorhabditis elegans
Exon152203   188   IV: 13911659-13911846 Caenorhabditis elegans
Exon152206   183   IV: 13912115-13912297 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y37A1A.2.2 13906001 13912297 -1

1 Sequence

Length
1515

1 Sequence Ontology Term

Identifier Name Description
transcript