WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y37A1A.4d.1 Sequence Name  Y37A1A.4d.1
Length (nt)  2958   Chromosome Location  IV: 13936475-13963734
Chromosome . Primary Identifier  IV Chromosome Location . Start  13936475
Chromosome Location . End  13963734 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y37A1A.4d.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00045063 Y37A1A.4 Y37A1A.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y37A1A.4d Y37A1A.4d 2958   IV: 13936475-13936501

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y37A1A.4d.1 13936475 13963734 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

15 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon152274   27   IV: 13936475-13936501 Caenorhabditis elegans
Exon152290   55   IV: 13938706-13938760 Caenorhabditis elegans
Exon152301   118   IV: 13940881-13940998 Caenorhabditis elegans
Exon152316   109   IV: 13943611-13943719 Caenorhabditis elegans
Exon152355   122   IV: 13952715-13952836 Caenorhabditis elegans
Exon152364   97   IV: 13953081-13953177 Caenorhabditis elegans
Exon152389   106   IV: 13956291-13956396 Caenorhabditis elegans
Exon152399   442   IV: 13957194-13957635 Caenorhabditis elegans
Exon152410   613   IV: 13958347-13958959 Caenorhabditis elegans
Exon152423   128   IV: 13960042-13960169 Caenorhabditis elegans
Exon152431   304   IV: 13960355-13960658 Caenorhabditis elegans
Exon152443   307   IV: 13961193-13961499 Caenorhabditis elegans
Exon152456   288   IV: 13962094-13962381 Caenorhabditis elegans
Exon152465   125   IV: 13963105-13963229 Caenorhabditis elegans
Exon152470   117   IV: 13963618-13963734 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y37A1A.4d.1 13936475 13963734 1

1 Sequence

Length
2958

1 Sequence Ontology Term

Identifier Name Description
transcript