WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y37A1A.4g.1 Sequence Name  Y37A1A.4g.1
Length (nt)  2925   Chromosome Location  IV: 13952715-13964004
Chromosome . Primary Identifier  IV Chromosome Location . Start  13952715
Chromosome Location . End  13964004 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y37A1A.4g.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00045063 Y37A1A.4 Y37A1A.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y37A1A.4g Y37A1A.4g 2619   IV: 13952751-13952836

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y37A1A.4g.1 13952715 13964004 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

11 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon152357   122   IV: 13952715-13952836 Caenorhabditis elegans
Exon152367   97   IV: 13953081-13953177 Caenorhabditis elegans
Exon152385   112   IV: 13956285-13956396 Caenorhabditis elegans
Exon152402   442   IV: 13957194-13957635 Caenorhabditis elegans
Exon152413   613   IV: 13958347-13958959 Caenorhabditis elegans
Exon152426   128   IV: 13960042-13960169 Caenorhabditis elegans
Exon152434   304   IV: 13960355-13960658 Caenorhabditis elegans
Exon152446   307   IV: 13961193-13961499 Caenorhabditis elegans
Exon152459   288   IV: 13962094-13962381 Caenorhabditis elegans
Exon152468   125   IV: 13963105-13963229 Caenorhabditis elegans
Exon152476   387   IV: 13963618-13964004 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y37A1A.4g.1 13952715 13964004 1

1 Sequence

Length
2925

1 Sequence Ontology Term

Identifier Name Description
transcript