WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y37A1B.17c.1 Sequence Name  Y37A1B.17c.1
Length (nt)  4161   Chromosome Location  IV: 13964845-13978847
Chromosome . Primary Identifier  IV Chromosome Location . Start  13964845
Chromosome Location . End  13978847 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y37A1B.17c.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00044989 dnbp-1 Y37A1B.17 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y37A1B.17c Y37A1B.17c 4161   IV: 13964845-13965030

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y37A1B.17c.1 13964845 13978847 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

17 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon152482   186   IV: 13964845-13965030 Caenorhabditis elegans
Exon152486   122   IV: 13972310-13972431 Caenorhabditis elegans
Exon152489   108   IV: 13972493-13972600 Caenorhabditis elegans
Exon152492   107   IV: 13972652-13972758 Caenorhabditis elegans
Exon152496   1310   IV: 13972808-13974117 Caenorhabditis elegans
Exon152500   204   IV: 13974979-13975182 Caenorhabditis elegans
Exon152502   93   IV: 13975230-13975322 Caenorhabditis elegans
Exon152504   206   IV: 13975379-13975584 Caenorhabditis elegans
Exon152506   148   IV: 13975642-13975789 Caenorhabditis elegans
Exon152508   131   IV: 13975837-13975967 Caenorhabditis elegans
Exon152510   106   IV: 13976020-13976125 Caenorhabditis elegans
Exon152512   150   IV: 13976177-13976326 Caenorhabditis elegans
Exon152514   122   IV: 13976372-13976493 Caenorhabditis elegans
Exon152516   115   IV: 13976547-13976661 Caenorhabditis elegans
Exon152519   465   IV: 13976956-13977420 Caenorhabditis elegans
Exon152521   460   IV: 13977474-13977933 Caenorhabditis elegans
Exon152524   128   IV: 13978720-13978847 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y37A1B.17c.1 13964845 13978847 -1

1 Sequence

Length
4161

1 Sequence Ontology Term

Identifier Name Description
transcript