WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y37A1B.17c.1 Sequence Name  Y37A1B.17c.1
Length (nt)  4161   Chromosome Location  IV: 13964845-13978847
Chromosome . Primary Identifier  IV Chromosome Location . Start  13964845
Chromosome Location . End  13978847 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y37A1B.17c.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00044989 dnbp-1 Y37A1B.17 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y37A1B.17c Y37A1B.17c 4161   IV: 13964845-13965030

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y37A1B.17c.1 13964845 13978847 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

17 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon152537   186   IV: 13964845-13965030 Caenorhabditis elegans
Exon152541   122   IV: 13972310-13972431 Caenorhabditis elegans
Exon152544   108   IV: 13972493-13972600 Caenorhabditis elegans
Exon152547   107   IV: 13972652-13972758 Caenorhabditis elegans
Exon152551   1310   IV: 13972808-13974117 Caenorhabditis elegans
Exon152555   204   IV: 13974979-13975182 Caenorhabditis elegans
Exon152557   93   IV: 13975230-13975322 Caenorhabditis elegans
Exon152559   206   IV: 13975379-13975584 Caenorhabditis elegans
Exon152561   148   IV: 13975642-13975789 Caenorhabditis elegans
Exon152563   131   IV: 13975837-13975967 Caenorhabditis elegans
Exon152565   106   IV: 13976020-13976125 Caenorhabditis elegans
Exon152567   150   IV: 13976177-13976326 Caenorhabditis elegans
Exon152569   122   IV: 13976372-13976493 Caenorhabditis elegans
Exon152571   115   IV: 13976547-13976661 Caenorhabditis elegans
Exon152574   465   IV: 13976956-13977420 Caenorhabditis elegans
Exon152576   460   IV: 13977474-13977933 Caenorhabditis elegans
Exon152579   128   IV: 13978720-13978847 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y37A1B.17c.1 13964845 13978847 -1

1 Sequence

Length
4161

1 Sequence Ontology Term

Identifier Name Description
transcript