WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y37A1B.11b.1 Sequence Name  Y37A1B.11b.1
Length (nt)  2281   Chromosome Location  IV: 13989081-14012074
Chromosome . Primary Identifier  IV Chromosome Location . Start  13989081
Chromosome Location . End  14012074 Method  Coding_transcript
Quick Links:
 
Quick Links:
 

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y37A1B.11b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001190 egl-23 Y37A1B.11 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y37A1B.11b Y37A1B.11b 2181   IV: 13989133-13989161

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y37A1B.11b.1 13989081 14012074 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

13 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon152567   81   IV: 13989081-13989161 Caenorhabditis elegans
Exon152613   133   IV: 13998964-13999096 Caenorhabditis elegans
Exon152631   154   IV: 14003858-14004011 Caenorhabditis elegans
Exon152636   94   IV: 14004505-14004598 Caenorhabditis elegans
Exon152645   70   IV: 14005096-14005165 Caenorhabditis elegans
Exon152653   229   IV: 14006057-14006285 Caenorhabditis elegans
Exon152660   160   IV: 14007044-14007203 Caenorhabditis elegans
Exon152669   306   IV: 14007567-14007872 Caenorhabditis elegans
Exon152686   159   IV: 14009890-14010048 Caenorhabditis elegans
Exon152693   194   IV: 14010222-14010415 Caenorhabditis elegans
Exon152698   171   IV: 14010790-14010960 Caenorhabditis elegans
Exon152704   144   IV: 14011366-14011509 Caenorhabditis elegans
Exon152709   386   IV: 14011689-14012074 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y37A1B.11b.1 13989081 14012074 1

1 Sequence

Length
2281

1 Sequence Ontology Term

Identifier Name Description
transcript