WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y37A1B.11a.1 Sequence Name  Y37A1B.11a.1
Length (nt)  2129   Chromosome Location  IV: 14003693-14012073
Chromosome . Primary Identifier  IV Chromosome Location . Start  14003693
Chromosome Location . End  14012073 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y37A1B.11a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001190 egl-23 Y37A1B.11 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y37A1B.11a Y37A1B.11a 2076   IV: 14003699-14003755

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y37A1B.11a.1 14003693 14012073 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

12 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon152683   63   IV: 14003693-14003755 Caenorhabditis elegans
Exon152685   154   IV: 14003858-14004011 Caenorhabditis elegans
Exon152690   94   IV: 14004505-14004598 Caenorhabditis elegans
Exon152699   70   IV: 14005096-14005165 Caenorhabditis elegans
Exon152707   229   IV: 14006057-14006285 Caenorhabditis elegans
Exon152714   160   IV: 14007044-14007203 Caenorhabditis elegans
Exon152723   306   IV: 14007567-14007872 Caenorhabditis elegans
Exon152740   159   IV: 14009890-14010048 Caenorhabditis elegans
Exon152747   194   IV: 14010222-14010415 Caenorhabditis elegans
Exon152752   171   IV: 14010790-14010960 Caenorhabditis elegans
Exon152758   144   IV: 14011366-14011509 Caenorhabditis elegans
Exon152763   385   IV: 14011689-14012073 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y37A1B.11a.1 14003693 14012073 1

1 Sequence

Length
2129

1 Sequence Ontology Term

Identifier Name Description
transcript