WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y37A1B.9.1 Sequence Name  Y37A1B.9.1
Length (nt)  1518   Chromosome Location  IV: 14016099-14019983
Chromosome . Primary Identifier  IV Chromosome Location . Start  14016099
Chromosome Location . End  14019983 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y37A1B.9.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00012542 irld-56 Y37A1B.9 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y37A1B.9 Y37A1B.9 1518   IV: 14016099-14016199

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y37A1B.9.1 14016099 14019983 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

8 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon152722   101   IV: 14016099-14016199 Caenorhabditis elegans
Exon152723   130   IV: 14016245-14016374 Caenorhabditis elegans
Exon152724   68   IV: 14016603-14016670 Caenorhabditis elegans
Exon152726   373   IV: 14016802-14017174 Caenorhabditis elegans
Exon152728   296   IV: 14017220-14017515 Caenorhabditis elegans
Exon152730   201   IV: 14018738-14018938 Caenorhabditis elegans
Exon152731   240   IV: 14018986-14019225 Caenorhabditis elegans
Exon152736   109   IV: 14019875-14019983 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y37A1B.9.1 14016099 14019983 -1

1 Sequence

Length
1518

1 Sequence Ontology Term

Identifier Name Description
transcript