WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

Nc Primary Transcript :

WormMine ID  Transcript:Y37A1B.5c Sequence Name  Y37A1B.5c
Length (nt)  1881   Chromosome Location  IV: 14051222-14056625
Chromosome . Primary Identifier  IV Chromosome Location . Start  14051222
Chromosome Location . End  14056625 Method  non_coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y37A1B.5c

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00012538 semo-1 Y37A1B.5 Caenorhabditis elegans
 

Other

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:Y37A1B.5c 14051222 14056625 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

6 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon152895   174   IV: 14051222-14051395 Caenorhabditis elegans
Exon152900   98   IV: 14051836-14051933 Caenorhabditis elegans
Exon152908   371   IV: 14052461-14052831 Caenorhabditis elegans
Exon152912   668   IV: 14052984-14053651 Caenorhabditis elegans
Exon152933   407   IV: 14055474-14055880 Caenorhabditis elegans
Exon152939   163   IV: 14056463-14056625 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:Y37A1B.5c 14051222 14056625 1

1 Sequence

Length
1881

1 Sequence Ontology Term

Identifier Name Description
transcript