WormMine: Gene WBGene00171210

• WormBase Gene ID: WBGene00171210
• Gene Name: 21ur-11643
• Sequence Name: Y37A1B.269
• Organism: Caenorhabditis elegans
• Automated Description: Is affected by several genes including emr-1; hmg-4; and lem-2 based on RNA-seq studies.
• Biotype: SO:0001638
• Genetic Position: IV :11.2531±
• Length (nt): 21

1 Organism

• Name: Caenorhabditis elegans
• Taxon Id: 6239

1 Synonyms

• Value: WBGene00171210

Genomics

1 Transcripts

WormMine ID	Sequence Name	Length (nt)	Chromosome Location
Transcript:Y37A1B.269	Y37A1B.269	21	IV: 14052777-14052797

Other

0 CDSs

0 RNAi Result

9 Allele

• gk964078
• gk963546
• gk963547
• gk964500
• gk962765
• gk964111
• gk964110
• gk962794
• gk907568

1 Chromosome

• WormBase ID: IV
• Organism: Caenorhabditis elegans
• Length (nt): 17493829

1 Chromosome Location

• Feature . Primary Identifier: WBGene00171210
• Start: 14052777
• End: 14052797
• Strand: -1

2 Data Sets

• WormBaseAcedbConverter
• C. elegans genomic annotations (GFF3 Gene)

0 Downstream Intergenic Region

3 Expression Clusters

Regulated By Treatment	Description	Algorithm	Primary Identifier
	Transcripts that showed significantly increased expression in hmg-4(RNAi) comparing to in vector control worm at L4 larva stage.	DESeq 2, fold change > 4, adjusted p-value < 0.05.	WBPaper00055013:hmg-4(RNAi)_upregulated
	Genes that showed increased mRNA expression in emr-1(RNAi);lem-2(tm1582) comparing to N2.	Library siggenes in R was applied to select the differentially expressed loci using the false discovery rate-based SAM method. Genes presenting a delta value > 4 were considered to be significantly altered.	WBPaper00044786:emr-1(RNAi);lem-2(tm1582)_upregulated
	Transcripts that showed significantly increased expression in Y37A1B.5(RNAi) comparing to N2 animals injected with empty vector at young adult stage.	DESeq2 v1.16.1, fold change > 2, adjusted p-value < 0.05.	WBPaper00058648:Y37A1B.5(RNAi)_upregulated

0 Expression Patterns

0 GO Annotation

0 Homologues

1 Locations

• Feature . Primary Identifier: WBGene00171210
• Start: 14052777
• End: 14052797
• Strand: -1

0 Ontology Annotations

0 Regulates Expr Cluster

1 Sequence

• Length: 21

1 Sequence Ontology Term