WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y37A1B.1b.1 Sequence Name  Y37A1B.1b.1
Length (nt)  3445   Chromosome Location  IV: 14071548-14076740
Chromosome . Primary Identifier  IV Chromosome Location . Start  14071548
Chromosome Location . End  14076740 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y37A1B.1b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003085 ccar-1 Y37A1B.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y37A1B.1b Y37A1B.1b 1530   IV: 14071550-14071783

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y37A1B.1b.1 14071548 14076740 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

8 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon152998   236   IV: 14071548-14071783 Caenorhabditis elegans
Exon153001   146   IV: 14071862-14072007 Caenorhabditis elegans
Exon153004   968   IV: 14072123-14073090 Caenorhabditis elegans
Exon153007   151   IV: 14073493-14073643 Caenorhabditis elegans
Exon153012   324   IV: 14074625-14074948 Caenorhabditis elegans
Exon153015   1054   IV: 14075008-14076061 Caenorhabditis elegans
Exon153018   233   IV: 14076123-14076355 Caenorhabditis elegans
Exon153021   333   IV: 14076408-14076740 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y37A1B.1b.1 14071548 14076740 1

1 Sequence

Length
3445

1 Sequence Ontology Term

Identifier Name Description
transcript