WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y37A1B.1d.1 Sequence Name  Y37A1B.1d.1
Length (nt)  1776   Chromosome Location  IV: 14074658-14076605
Chromosome . Primary Identifier  IV Chromosome Location . Start  14074658
Chromosome Location . End  14076605 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y37A1B.1d.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003085 ccar-1 Y37A1B.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y37A1B.1d Y37A1B.1d 1776   IV: 14074658-14074948

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y37A1B.1d.1 14074658 14076605 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

4 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon153013   291   IV: 14074658-14074948 Caenorhabditis elegans
Exon153016   1054   IV: 14075008-14076061 Caenorhabditis elegans
Exon153019   233   IV: 14076123-14076355 Caenorhabditis elegans
Exon153020   198   IV: 14076408-14076605 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y37A1B.1d.1 14074658 14076605 1

1 Sequence

Length
1776

1 Sequence Ontology Term

Identifier Name Description
transcript