WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:F52B11.1a Sequence Name  F52B11.1a
Length (nt)  1527   Chromosome Location  IV: 14077450-14077618
Chromosome . Primary Identifier  IV Chromosome Location . Start  14077450
Chromosome Location . End  14077618
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F52B11.1a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE33791 CFP-1, isoform a 58.1 508 Caenorhabditis elegans
 

Other

8 RNAi

WormBase ID
WBRNAi00047913
WBRNAi00015364
WBRNAi00081791
WBRNAi00081858
WBRNAi00032578
WBRNAi00097952
WBRNAi00061820
WBRNAi00081881

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:F52B11.1a 14077450 14077618 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00009924 cfp-1 F52B11.1 Caenorhabditis elegans

6 Locations


Feature . Primary Identifier
Start End Strand
CDS:F52B11.1a 14077450 14077618 1
CDS:F52B11.1a 14078686 14078969 1
CDS:F52B11.1a 14080149 14080499 1
CDS:F52B11.1a 14081429 14081739 1
CDS:F52B11.1a 14081965 14082170 1
CDS:F52B11.1a 14082819 14083024 1

1 Sequence

Length
1527

1 Sequence Ontology Term

Identifier Name Description
CDS  

2 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:F52B11.1a.2 F52B11.1a.2 2086   IV: 14077435-14083568
Transcript:F52B11.1a.1 F52B11.1a.1 1843   IV: 14077441-14083559