WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y37A1C.1c.2 Sequence Name  Y37A1C.1c.2
Length (nt)  4206   Chromosome Location  IV: 14107656-14124043
Chromosome . Primary Identifier  IV Chromosome Location . Start  14107656
Chromosome Location . End  14124043 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y37A1C.1c.2

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00012543 nkcc-1 Y37A1C.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y37A1C.1c Y37A1C.1c 3633   IV: 14108149-14108284

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y37A1C.1c.2 14107656 14124043 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

15 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon153169   629   IV: 14107656-14108284 Caenorhabditis elegans
Exon153178   413   IV: 14108342-14108754 Caenorhabditis elegans
Exon153186   73   IV: 14109105-14109177 Caenorhabditis elegans
Exon153194   184   IV: 14109226-14109409 Caenorhabditis elegans
Exon153206   236   IV: 14110635-14110870 Caenorhabditis elegans
Exon153215   266   IV: 14110916-14111181 Caenorhabditis elegans
Exon153225   470   IV: 14111793-14112262 Caenorhabditis elegans
Exon153233   232   IV: 14112539-14112770 Caenorhabditis elegans
Exon153241   497   IV: 14112915-14113411 Caenorhabditis elegans
Exon153250   184   IV: 14113464-14113647 Caenorhabditis elegans
Exon153257   312   IV: 14114280-14114591 Caenorhabditis elegans
Exon153266   372   IV: 14114971-14115342 Caenorhabditis elegans
Exon153274   144   IV: 14115407-14115550 Caenorhabditis elegans
Exon153282   132   IV: 14115921-14116052 Caenorhabditis elegans
Exon153314   62   IV: 14123982-14124043 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y37A1C.1c.2 14107656 14124043 -1

1 Sequence

Length
4206

1 Sequence Ontology Term

Identifier Name Description
transcript