WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y37A1C.1d.1 Sequence Name  Y37A1C.1d.1
Length (nt)  2613   Chromosome Location  IV: 14108149-14113569
Chromosome . Primary Identifier  IV Chromosome Location . Start  14108149
Chromosome Location . End  14113569 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y37A1C.1d.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00012543 nkcc-1 Y37A1C.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y37A1C.1d Y37A1C.1d 2613   IV: 14108149-14108284

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y37A1C.1d.1 14108149 14113569 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon153176   136   IV: 14108149-14108284 Caenorhabditis elegans
Exon153179   413   IV: 14108342-14108754 Caenorhabditis elegans
Exon153187   73   IV: 14109105-14109177 Caenorhabditis elegans
Exon153195   184   IV: 14109226-14109409 Caenorhabditis elegans
Exon153207   236   IV: 14110635-14110870 Caenorhabditis elegans
Exon153216   266   IV: 14110916-14111181 Caenorhabditis elegans
Exon153226   470   IV: 14111793-14112262 Caenorhabditis elegans
Exon153234   232   IV: 14112539-14112770 Caenorhabditis elegans
Exon153242   497   IV: 14112915-14113411 Caenorhabditis elegans
Exon153247   106   IV: 14113464-14113569 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y37A1C.1d.1 14108149 14113569 -1

1 Sequence

Length
2613

1 Sequence Ontology Term

Identifier Name Description
transcript