WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y37A1C.1b.1 Sequence Name  Y37A1C.1b.1
Length (nt)  789   Chromosome Location  IV: 14114741-14116034
Chromosome . Primary Identifier  IV Chromosome Location . Start  14114741
Chromosome Location . End  14116034 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y37A1C.1b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00012543 nkcc-1 Y37A1C.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y37A1C.1b Y37A1C.1b 789   IV: 14114741-14114899

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y37A1C.1b.1 14114741 14116034 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

4 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon153262   159   IV: 14114741-14114899 Caenorhabditis elegans
Exon153264   372   IV: 14114971-14115342 Caenorhabditis elegans
Exon153272   144   IV: 14115407-14115550 Caenorhabditis elegans
Exon153281   114   IV: 14115921-14116034 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y37A1C.1b.1 14114741 14116034 -1

1 Sequence

Length
789

1 Sequence Ontology Term

Identifier Name Description
transcript