WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:H12I19.1.1 Sequence Name  H12I19.1.1
Length (nt)  984   Chromosome Location  IV: 14129391-14131061
Chromosome . Primary Identifier  IV Chromosome Location . Start  14129391
Chromosome Location . End  14131061 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
H12I19.1.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00010388 srz-42 H12I19.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:H12I19.1 H12I19.1 984   IV: 14129391-14129564

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:H12I19.1.1 14129391 14131061 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

5 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon153404   174   IV: 14129391-14129564 Caenorhabditis elegans
Exon153405   116   IV: 14129608-14129723 Caenorhabditis elegans
Exon153409   280   IV: 14130084-14130363 Caenorhabditis elegans
Exon153410   162   IV: 14130601-14130762 Caenorhabditis elegans
Exon153411   252   IV: 14130810-14131061 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:H12I19.1.1 14129391 14131061 1

1 Sequence

Length
984

1 Sequence Ontology Term

Identifier Name Description
transcript