WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:R05A10.1.1 Sequence Name  R05A10.1.1
Length (nt)  1101   Chromosome Location  IV: 14182377-14190691
Chromosome . Primary Identifier  IV Chromosome Location . Start  14182377
Chromosome Location . End  14190691 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
R05A10.1.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00011018 R05A10.1 R05A10.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:R05A10.1 R05A10.1 996   IV: 14182379-14182522

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:R05A10.1.1 14182377 14190691 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

5 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon153587   146   IV: 14182377-14182522 Caenorhabditis elegans
Exon153589   210   IV: 14182719-14182928 Caenorhabditis elegans
Exon153598   99   IV: 14183874-14183972 Caenorhabditis elegans
Exon153600   181   IV: 14184255-14184435 Caenorhabditis elegans
Exon153609   465   IV: 14190227-14190691 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:R05A10.1.1 14182377 14190691 1

1 Sequence

Length
1101

1 Sequence Ontology Term

Identifier Name Description
transcript