Genomics
1 Transcripts
| WormMine ID | Sequence Name | Length (nt) | Chromosome Location |
|---|---|---|---|
| Transcript:K01G12.22.1 | K01G12.22.1 |
324
 |
IV: 14192219-14192674 |
Other
1 CDSs
| WormMine ID | Sequence Name | Length (nt) | Chromosome Location |
|---|---|---|---|
| CDS:K01G12.22 | K01G12.22 |
324
|
IV: 14192219-14192365 |
26 Allele
| Public Name |
|---|
| gk964078 |
| gk963546 |
| gk963547 |
| gk964500 |
| gk962765 |
| gk473749 |
| gk899068 |
| gk488217 |
| gk901250 |
| gk535691 |
| WBVar02121222 |
| WBVar02124359 |
| WBVar02124017 |
| WBVar02124117 |
| WBVar02124217 |
| WBVar02123517 |
| WBVar02123104 |
| WBVar02124801 |
| WBVar02124706 |
| WBVar02124598 |
| WBVar02037722 |
| gk217826 |
| WBVar01797094 |
| WBVar01797093 |
| gk217827 |
| WBVar01732352 |
1 Chromosome Location
|
Feature . Primary Identifier |
Start | End | Strand |
|---|---|---|---|
| WBGene00271789 | 14192219 | 14192674 | 1 |
1 Downstream Intergenic Region
| WormBase ID | Name | Sequence Name | Length (nt) | Chromosome Location | Organism |
|---|---|---|---|---|---|
| intergenic_region_chrIV_14192675..14192969 | 295 | IV: 14192675-14192969 | Caenorhabditis elegans |
4 Expression Clusters
| Regulated By Treatment | Description | Algorithm | Primary Identifier |
|---|---|---|---|
| Transcripts that showed significantly decreased expression in adr-1(tm668) comparing to in N2. | DESeq2, p-value < 0.05 and a fold enrichment log2fold > 0.5. | WBPaper00055226:adr-1(tm668)_downregulated | |
| Genes predicted to be upregulated more than 2.0 fold in rde-3(r459) mutant worms as compared to wild-type animals (t-test P-value < 0.05). | A t-test (5% confidence) was applied to the triplicate sample data for each transcript in each mutant to identify genes significantly elevated or decreased compared with the wild type. | WBPaper00027111:rde-3(r459)_upregulated | |
| Genes predicted to be upregulated more than 2.0 fold in rrf-3(pk1426) mutant worms as compared to wild-type animals (t-test P-value < 0.05). | A t-test (5% confidence) was applied to the triplicate sample data for each transcript in each mutant to identify genes significantly elevated or decreased compared with the wild type. | WBPaper00027111:rrf-3(pk1426)_upregulated | |
| Genes predicted to be upregulated more than 2.0 fold in rde-3(ne298) mutant worms as compared to wild-type animals (t-test P-value < 0.05). | A t-test (5% confidence) was applied to the triplicate sample data for each transcript in each mutant to identify genes significantly elevated or decreased compared with the wild type. | WBPaper00027111:rde-3(ne298)_upregulated |