WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:F02H6.5a Sequence Name  F02H6.5a
Length (nt)  1416   Chromosome Location  IV: 14220033-14220057
Chromosome . Primary Identifier  IV Chromosome Location . Start  14220033
Chromosome Location . End  14220057
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F02H6.5a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE17629 SQRD-1, isoform a 52.9 471 Caenorhabditis elegans
 

Other

1 RNAi

WormBase ID
WBRNAi00043837

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:F02H6.5a 14220033 14220057 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00008538 sqrd-1 F02H6.5 Caenorhabditis elegans

8 Locations


Feature . Primary Identifier
Start End Strand
CDS:F02H6.5a 14220033 14220057 1
CDS:F02H6.5a 14220979 14221316 1
CDS:F02H6.5a 14221590 14221688 1
CDS:F02H6.5a 14222334 14222627 1
CDS:F02H6.5a 14222794 14222964 1
CDS:F02H6.5a 14223129 14223236 1
CDS:F02H6.5a 14223547 14223690 1
CDS:F02H6.5a 14224121 14224357 1

1 Sequence

Length
1416

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:F02H6.5a.1 F02H6.5a.1 1661   IV: 14219871-14224440