WormMine

WS296

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F02H6.5b.1 Sequence Name  F02H6.5b.1
Length (nt)  1451   Chromosome Location  IV: 14219931-14224437
Chromosome . Primary Identifier  IV Chromosome Location . Start  14219931
Chromosome Location . End  14224437 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F02H6.5b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00008538 sqrd-1 F02H6.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F02H6.5b F02H6.5b 1269   IV: 14220033-14220057

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F02H6.5b.1 14219931 14224437 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

8 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon153713   127   IV: 14219931-14220057 Caenorhabditis elegans
Exon153719   338   IV: 14220979-14221316 Caenorhabditis elegans
Exon153727   99   IV: 14221590-14221688 Caenorhabditis elegans
Exon153733   147   IV: 14222334-14222480 Caenorhabditis elegans
Exon153742   171   IV: 14222794-14222964 Caenorhabditis elegans
Exon153751   108   IV: 14223129-14223236 Caenorhabditis elegans
Exon153762   144   IV: 14223547-14223690 Caenorhabditis elegans
Exon153773   317   IV: 14224121-14224437 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F02H6.5b.1 14219931 14224437 1

1 Sequence

Length
1451

1 Sequence Ontology Term

Identifier Name Description
transcript