WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y67A10A.1.1 Sequence Name  Y67A10A.1.1
Length (nt)  2008   Chromosome Location  IV: 14345383-14350751
Chromosome . Primary Identifier  IV Chromosome Location . Start  14345383
Chromosome Location . End  14350751 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y67A10A.1.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00013450 oac-56 Y67A10A.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y67A10A.1 Y67A10A.1 1935   IV: 14345435-14345602

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y67A10A.1.1 14345383 14350751 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

12 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon154461   220   IV: 14345383-14345602 Caenorhabditis elegans
Exon154466   190   IV: 14346202-14346391 Caenorhabditis elegans
Exon154468   84   IV: 14346440-14346523 Caenorhabditis elegans
Exon154471   109   IV: 14346814-14346922 Caenorhabditis elegans
Exon154472   121   IV: 14346973-14347093 Caenorhabditis elegans
Exon154475   308   IV: 14347221-14347528 Caenorhabditis elegans
Exon154480   121   IV: 14348247-14348367 Caenorhabditis elegans
Exon154481   336   IV: 14348416-14348751 Caenorhabditis elegans
Exon154484   129   IV: 14348805-14348933 Caenorhabditis elegans
Exon154490   172   IV: 14350256-14350427 Caenorhabditis elegans
Exon154492   93   IV: 14350478-14350570 Caenorhabditis elegans
Exon154493   125   IV: 14350627-14350751 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y67A10A.1.1 14345383 14350751 -1

1 Sequence

Length
2008

1 Sequence Ontology Term

Identifier Name Description
transcript