WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F55B11.6.1 Sequence Name  F55B11.6.1
Length (nt)  691   Chromosome Location  IV: 14416262-14417228
Chromosome . Primary Identifier  IV Chromosome Location . Start  14416262
Chromosome Location . End  14417228 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F55B11.6.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00044249 F55B11.6 F55B11.6 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F55B11.6 F55B11.6 276   IV: 14416747-14416757

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F55B11.6.1 14416262 14417228 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

6 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon154831   156   IV: 14416262-14416417 Caenorhabditis elegans
Exon154832   105   IV: 14416465-14416569 Caenorhabditis elegans
Exon154833   138   IV: 14416620-14416757 Caenorhabditis elegans
Exon154834   135   IV: 14416830-14416964 Caenorhabditis elegans
Exon154835   76   IV: 14417022-14417097 Caenorhabditis elegans
Exon154836   81   IV: 14417148-14417228 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F55B11.6.1 14416262 14417228 -1

1 Sequence

Length
691

1 Sequence Ontology Term

Identifier Name Description
transcript