WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:LLC1.1a Sequence Name  LLC1.1a
Length (nt)  1947   Chromosome Location  IV: 14436679-14436883
Chromosome . Primary Identifier  IV Chromosome Location . Start  14436679
Chromosome Location . End  14436883
Quick Links:
 
Quick Links:
 

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
LLC1.1a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE16260 TRA-3, isoform a 73.6 648 Caenorhabditis elegans
 

Other

23 RNAi

WormBase ID
WBRNAi00086773
WBRNAi00086774
WBRNAi00086763
WBRNAi00050707
WBRNAi00017080
WBRNAi00022748
WBRNAi00022749
WBRNAi00022750
WBRNAi00022751
WBRNAi00024341
WBRNAi00024342
WBRNAi00027711
WBRNAi00093247
WBRNAi00086771
WBRNAi00086772
WBRNAi00091837
WBRNAi00091802
WBRNAi00091807
WBRNAi00091812
WBRNAi00091817
WBRNAi00091822
WBRNAi00091827
WBRNAi00091832

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:LLC1.1a 14436679 14436883 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006606 tra-3 LLC1.1 Caenorhabditis elegans

8 Locations


Feature . Primary Identifier
Start End Strand
CDS:LLC1.1a 14436679 14436883 -1
CDS:LLC1.1a 14437075 14437277 -1
CDS:LLC1.1a 14438458 14438814 -1
CDS:LLC1.1a 14439806 14440169 -1
CDS:LLC1.1a 14441052 14441254 -1
CDS:LLC1.1a 14441594 14441780 -1
CDS:LLC1.1a 14442229 14442424 -1
CDS:LLC1.1a 14443918 14444149 -1

1 Sequence

Length
1947

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:LLC1.1a.1 LLC1.1a.1 2215   IV: 14436445-14444183