WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:LLC1.2a.1 Sequence Name  LLC1.2a.1
Length (nt)  986   Chromosome Location  IV: 14456900-14464098
Chromosome . Primary Identifier  IV Chromosome Location . Start  14456900
Chromosome Location . End  14464098 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
LLC1.2a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00010793 nspg-9 LLC1.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:LLC1.2a LLC1.2a 819   IV: 14457000-14457021

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:LLC1.2a.1 14456900 14464098 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

7 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon155006   122   IV: 14456900-14457021 Caenorhabditis elegans
Exon155017   220   IV: 14458684-14458903 Caenorhabditis elegans
Exon155027   88   IV: 14459852-14459939 Caenorhabditis elegans
Exon155029   64   IV: 14460065-14460128 Caenorhabditis elegans
Exon155047   121   IV: 14463498-14463618 Caenorhabditis elegans
Exon155048   149   IV: 14463673-14463821 Caenorhabditis elegans
Exon155051   222   IV: 14463877-14464098 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:LLC1.2a.1 14456900 14464098 1

1 Sequence

Length
986

1 Sequence Ontology Term

Identifier Name Description
transcript