WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y57G11A.4.2 Sequence Name  Y57G11A.4.2
Length (nt)  1000   Chromosome Location  IV: 14482284-14486453
Chromosome . Primary Identifier  IV Chromosome Location . Start  14482284
Chromosome Location . End  14486453 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y57G11A.4.2

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00013292 Y57G11A.4 Y57G11A.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y57G11A.4 Y57G11A.4 789   IV: 14482482-14482549

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y57G11A.4.2 14482284 14486453 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

8 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon155119   92   IV: 14482284-14482375 Caenorhabditis elegans
Exon155120   76   IV: 14482474-14482549 Caenorhabditis elegans
Exon155125   130   IV: 14482969-14483098 Caenorhabditis elegans
Exon155129   63   IV: 14483368-14483430 Caenorhabditis elegans
Exon155133   88   IV: 14483578-14483665 Caenorhabditis elegans
Exon155138   204   IV: 14484160-14484363 Caenorhabditis elegans
Exon155141   89   IV: 14484540-14484628 Caenorhabditis elegans
Exon155151   258   IV: 14486196-14486453 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y57G11A.4.2 14482284 14486453 1

1 Sequence

Length
1000

1 Sequence Ontology Term

Identifier Name Description
transcript